Predrag Radivojac


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June 9, 2009

Upper row: Daniel, Rajeswari, Pedja, Fuxiao, Yong, Amrita, Nathan, Sujun, Biao

Lower row: Gitte (with Hansel), Shuyan, Wyatt, Nils

 

 

Ph.D. students

•  Wyatt Clark (Informatics)

•  Jose Lugo-Martinez (Computer Science)

•  Vikas Pejaver (Informatics)

•  Fuxiao Xin (Informatics)

 

Unofficially:

•  Xin He (Informatics)

•  Chao Ji (Informatics)

•  Kymberleigh Pagel (Informatics)

 

Undergraduate students

•  Joseph Mikiska

 

 

Ph.D. Theses Supervised

  • Amrita Mohan. Title: A systematic study of intrinsic disorder and its roles in functional proteomics. Program: Informatics. Defense: October 23, 2009. Next position: Post-doctoral research fellow in cancer systems biology, OSI Pharmaceuticals, Melville, New York.

  • Yong Li. Title: Statistical learning algorithms for protein inference and quantification in proteomics. Program: Informatics. Defense: August 11, 2011. Next position: Senior biologist, Dow AgroSciences LLC, Indianapolis, Indiana.

 

Student Awards

  • Fuxiao Xin, 2011, Full Travel Award for Grace Hopper Conference, Portland, OR, Women in Informatics and Computing, Indiana University

  • Fuxiao Xin, 2011, $25,000 Don Brown Bioinformatics Fellowship, School of Informatics and Computing, Indiana University

  • Wyatt Clark, 2011, $1,500 Travel Award for AFP SIG at ISMB, National Human Genome Research Institute, National Institutes of Health

  • Chantel Mikiska, 2011, $1000, Hutton Honors College Professional Experience Internship Award

  • Jose Lugo-Martinez, 2010-2013, $66,000, Ford Foundation Predoctoral Diversity Fellowship.

  • Shuyan Li, 2010, $1,250 Travel Award for PSB 2010, National Library of Medicine, National Institutes of Health

  • Amrita Mohan, 2007-2009, $38,750 Lilly Fellowship, Eli Lilly and Company Foundation

  • Amrita Mohan, 2007, $600 Travel Award from NSF to attend Academic Workshop for Underrepresented Assistant Professors, Associate Professors, and Senior Doctoral Students, organized by the Coalition to Diversify Computing (CDC).

  • Amrita Mohan, 2007, Teaching Award, School of Informatics, Indiana University

  • Pedro Alves, 2007, $1,250 Travel Award for PSB 2007, National Institutes of Health

  • Wyatt Clark, 2006, $750 Travel Award for SDM 2006, Lawrence Livermore National Laboratory

  • James Costello, 2006, $750 Travel Award for SDM 2006, Lawrence Livermore National Laboratory

  • Narmada Jayasankar; $100, Best Poster Award, InWIC 2006

  • Kenneth Daily; 2005, $400, Travel Award for CIBCB 2005, IEEE Computational Intelligence Society

  • Stuart Young, 2004; $3000, McNair Fellowship, Indiana University

 

Alumni

 

Post-doctoral fellows

•  Sujun Li, 2009-2011, Scientist I, Biogen Idec, Cambridge, Massachusetts

•  Biao Li, 2008-2011, Post-doctoral fellow, Buck Institute for Research on Ageing, Novato, California

•  Kang Peng, 2006-2007

 

Ph.D. students

•  Yong Li, 2006-2011, Senior biologist, Dow AgroSciences, Indianapolis, Indiana

•  Amrita Mohan, 2006-2009, Post-doctoral fellow, OSI Pharmaceuticals, Melville, New York

 

Visitors

•  Shuyan Li, 2008-2010, Ph.D. student, Lanzhou University, China

 

M.S. students

•  Rajeswari Swaminathan, 2010, Research assistant, Boston University, Boston, Massachusetts

•  Nathan Nehrt, 2010, Research assistant, University of Maryland - Baltimore County, Baltimore, Maryland

•  Ryan Rene, 2009

•  Nils Schimmelmann, 2009, Software engineer, Yahoo!, Sunnyvale, California

•  Jun Ma, 2009, Assistant researcher, Shanghai Institutes for Biological Sciences, China

•  Dah Mee Ko, 2009

•  Arunima Ram, 2008, Software engineer, Interactive Intelligence, Indianapolis, Indiana

•  Harini Gopalakrishnan, 2007, Monarch Life Sciences, Indianapolis, Indiana

•  Aaron Buechlein, 2007, Quality assurance associate; Ingenuity Systems, Redwood City, California

•  Pedro Alves, 2007, Ph.D. student; Biological and Biomedical Sciences, Yale University

•  Sean Boyle, 2007, Ph.D. student; Genetics, Genomics and Bioinformatics, Department of Biology, UC Riverside

•  Narmada Jayasankar, 2006, Software design engineer in test; Core File Services, Microsoft, Redmond, Washington

•  Divya Aggarwal, 2006, Los Alamos National Laboratory, Los Alamos, New Mexico

•  Kenneth Daily, 2006, Ph.D. student; School of Information and Computer Science, UC Irvine

•  Sourav Roy, 2006, Ph.D. student, Genetics, Genomics and Bioinformatics, Department of Biology, UC Riverside

•  Stuart Young, 2004

 

Undergraduate students

•  Kymberleigh Pagel

•  Chantel Mikiska

•  Sarah Hale

•  Gitte Schimmelmann

•  Augusto Alves

•  Jennifer Moore

•  Wyatt Clark

 

Last modified: December 22, 2011